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nature-portfolio

nature-portfolio

github.com/kalarislabsDocuments7345 installsUpdated 3d ago
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About nature-portfolio

A manuscript-preparation skill for submitting research articles to Nature Portfolio journals. It guides authors through checking current journal-specific rules, structuring the paper, preparing required declarations and figures, and assembling submission files.

Key features

  1. 01Checks current journal and article limits
  2. 02Guides Nature-style manuscript structure
  3. 03Lists common required statements
  4. 04Provides figure and reference guidance
  5. 05Organizes submission-package checks

Use cases

  1. 01Prepare a research article for submission
  2. 02Check requirements for a specific journal type
  3. 03Assemble figures and declarations
  4. 04Review a submission package before sending

Install

Copy the command and run it in a terminal.

$npx skills add https://github.com/kalarislabs/research-agent-skills --skill nature-portfolio

After installing, type/nature-portfolioin Claude Code to confirm it loaded.

Details

From the project README

Nature Portfolio Journals

Workflow

  1. Identify the exact journal and article type, open its current author guidelines, and fill in the limits table below. Never rely on remembered limits.
  2. Check whether a format-free first submission is allowed. If it is, spend effort on content and mandatory statements rather than layout.
  3. Restructure the manuscript into the venue's front matter and sections (see below).
  4. Prepare the required statements, figures and supplementary files.
  5. Run the checklist, then assemble the submission package: manuscript, source files, figures, declarations and cover letter.

Verify first (mandatory)

Requirements differ by journal and article type and are revised often. Open the current guide for the exact journal (e.g. https://www.nature.com/nature/for-authors and its formatting guide, or https://www.nature.com/<journal>/submission-guidelines). Record what you found before editing:

ItemLimit for this journal/type (fill in from guide)
Abstract / summary paragraph length, referenced or not
Main text length (what it includes and excludes)
Display items (figures + tables)
Reference limit
Methods length / placement
Extended Data / Supplementary Information rules
Title length

Many Nature Portfolio journals accept a format-free initial submission. Check whether strict formatting is needed only at revision. Don't spend effort formatting prematurely.

Structure (Nature-style research Article)

  • Title: short, no abbreviations, no punctuation-heavy constructions. Declarative titles are common.
  • Summary paragraph (Nature) / Abstract (most other titles): Nature's summary paragraph is a single referenced paragraph that introduces the field for non-specialists, states the gap, then gives the main result and its implication. Other titles use a conventional unreferenced abstract.
  • Main text: minimal or no "Introduction" heading in Nature. Results use short subheadings that state findings. Discussion is brief. Written for a broad scientific audience.
  • Methods: after the main text (online Methods). Detailed enough to reproduce. Includes statistics.
  • Figures: few, dense, multi-panel. Legends begin with a one-sentence title and define n, statistical tests and error bars.
  • Extended Data: a limited number of extra figures/tables (check the limit), each with a legend. Additional material goes in Supplementary Information.

Mandatory elements (commonly required)

  • Reporting Summary (life sciences, behavioural, ecological research) and editorial policy checklists.
  • Data availability and code availability statements with accession codes/DOIs (see reproducibility-statement).
  • Source Data files for graphs where requested.
  • Author contributions, competing interests, acknowledgements, corresponding author.
  • Statistics: exact n, what n is (biological vs technical replicates), test used, exact P values where possible, and definitions of centre and error bars.
  • Image integrity: no selective enhancement. Keep unprocessed blots/gels for Source Data.
  • Ethics approvals and consent statements. Clinical trial registration where applicable.

References and style

Nature style: numbered superscripts in order of first citation. References list includes all authors up to a threshold, then et al., with journal abbreviations. Use the Nature CSL style (Zotero/Pandoc) or the Nature Portfolio LaTeX template's .bst (naturemag/template default). Don't hand-format.

Figures

  • Size to final column widths (single/double column; check the guide), with sans-serif fonts at legible sizes, vector formats for line art, and sufficient resolution for images.
  • Colour-blind-safe palettes. Avoid red/green contrasts. See scientific-visualization.
  • No figure titles inside the image. The title goes in the legend.

Process tips

  • Presubmission enquiry: optional for many titles. Send the abstract plus a significance pitch (see cover-letter-to-editor).
  • Transfers: rejected manuscripts can transfer within the portfolio with reviews. Nature Communications and Scientific Reports are common destinations.
  • Preprints are allowed (arXiv, bioRxiv, medRxiv, Research Square). Disclose them in the cover letter.
  • Embargo: accepted papers are under press embargo until publication.

Related skills

venue-templates (bundled Nature LaTeX scaffold), abstract-and-title, cover-letter-to-editor, reproducibility-statement, scientific-visualization, statistical-analysis, rebuttal-and-response-to-reviewers.

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