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Causal Inference

Causal Inference

github.com/aj-geddes数据与数据库373536 次安装34 周前更新
代码仓库

关于 Causal Inference

用于分析因果关系并估计实验或观察数据中的处理效应,涵盖常见方法、假设、诊断与报告。

主要功能

  1. 01因果图可视化
  2. 02处理效应估计
  3. 03敏感性分析
  4. 04异质性效应分析
  5. 05协变量平衡与倾向评分诊断
  6. 06因果推断报告

适用场景

  1. 01评估政策或业务干预
  2. 02在无法随机实验时估计效果
  3. 03控制观察数据中的混杂因素
  4. 04比较不同用户群体的效果

安装

复制下面的命令,在终端中运行。

$npx skills add https://github.com/aj-geddes/useful-ai-prompts --skill causal-inference

安装后在 Claude Code 中输入/causal-inference确认已加载。

附带文件scripts/scaffold-analysis.shtemplates/notebook-template.py

详细介绍

因果推断

概述

因果推断用于确定因果关系并估计处理效应,超越相关性分析,理解什么因素导致了什么结果。

适用场景

  • 评估政策干预或商业决策的影响
  • 在无法开展随机实验时估计处理效应
  • 控制观察数据中的混杂变量
  • 确定营销活动或产品变更是否导致了某种结果
  • 分析不同用户群体中异质性的处理效应
  • 使用倾向评分或工具变量,基于非实验数据提出因果结论

核心概念

  • 处理:干预或暴露
  • 结果:结果或后果
  • 混杂:同时影响处理和结果的变量
  • 因果图:关系的可视化表示
  • 处理效应:干预的影响
  • 选择偏差:非随机的处理分配

因果方法

  • 随机对照试验(RCT):黄金标准
  • 倾向评分匹配:平衡处理组与对照组
  • 双重差分:前后对比
  • 工具变量:处理内生性
  • 因果森林:异质性处理效应

使用 Python 实现

import pandas as pd
import numpy as np
import matplotlib.pyplot as plt
import seaborn as sns
from sklearn.linear_model import LinearRegression, LogisticRegression
from sklearn.preprocessing import StandardScaler
from scipy import stats

# Generate observational data with confounding
np.random.seed(42)

n = 1000

# Confounder: Age (affects both treatment and outcome)
age = np.random.uniform(25, 75, n)

# Treatment: Training program (more likely for younger people)
treatment_prob = 0.3 + 0.3 * (75 - age) / 50  # Inverse relationship with age
treatment = (np.random.uniform(0, 1, n) < treatment_prob).astype(int)

# Outcome: Salary (affected by both treatment and age)
# True causal effect of treatment: +$5000
salary = 40000 + 500 * age + 5000 * treatment + np.random.normal(0, 10000, n)

df = pd.DataFrame({
    'age': age,
    'treatment': treatment,
    'salary': salary,
})

print("Observational Data Summary:")
print(df.describe())
print(f"\nTreatment Rate: {df['treatment'].mean():.1%}")
print(f"Average Salary (Control): ${df[df['treatment']==0]['salary'].mean():.0f}")
print(f"Average Salary (Treatment): ${df[df['treatment']==1]['salary'].mean():.0f}")

# 1. Naive Comparison (BIASED - ignores confounding)
naive_effect = df[df['treatment']==1]['salary'].mean() - df[df['treatment']==0]['salary'].mean()
print(f"\n1. Naive Comparison: ${naive_effect:.0f} (BIASED)")

# 2. Regression Adjustment (Covariate Adjustment)
X = df[['treatment', 'age']]
y = df['salary']
model = LinearRegression()
model.fit(X, y)
regression_effect = model.coef_[0]

print(f"\n2. Regression Adjustment: ${regression_effect:.0f}")

# 3. Propensity Score Matching
# Estimate probability of treatment given covariates
ps_model = LogisticRegression()
ps_model.fit(df[['age']], df['treatment'])
df['propensity_score'] = ps_model.predict_proba(df[['age']])[:, 1]

print(f"\n3. Propensity Score Matching:")
print(f"PS range: [{df['propensity_score'].min():.3f}, {df['propensity_score'].max():.3f}]")

# Matching: find control for each treated unit
matched_pairs = []
treated_units = df[df['treatment'] == 1].index
for treated_idx in treated_units:
    treated_ps = df.loc[treated_idx, 'propensity_score']
    treated_age = df.loc[treated_idx, 'age']

    # Find closest control unit
    control_units = df[(df['treatment'] == 0) &
                      (df['propensity_score'] >= treated_ps - 0.1) &
                      (df['propensity_score'] <= treated_ps + 0.1)].index

    if len(control_units) > 0:
        closest_control = min(control_units,
                             key=lambda x: abs(df.loc[x, 'propensity_score'] - treated_ps))
        matched_pairs.append({
            'treated_idx': treated_idx,
            'control_idx': closest_control,
            'treated_salary': df.loc[treated_idx, 'salary'],
            'control_salary': df.loc[closest_control, 'salary'],
        })

matched_df = pd.DataFrame(matched_pairs)
psm_effect = (matched_df['treated_salary'] - matched_df['control_salary']).mean()
print(f"PSM Effect: ${psm_effect:.0f}")
print(f"Matched pairs: {len(matched_df)}")

# 4. Stratification by Propensity Score
df['ps_stratum'] = pd.qcut(df['propensity_score'], q=5, labels=False, duplicates='drop')

stratified_effects = []
for stratum in df['ps_stratum'].unique():
    stratum_data = df[df['ps_stratum'] == stratum]
    if (stratum_data['treatment'] == 0).sum() > 0 and (stratum_data['treatment'] == 1).sum() > 0:
        treated_mean = stratum_data[stratum_data['treatment'] == 1]['salary'].mean()
        control_mean = stratum_data[stratum_data['treatment'] == 0]['salary'].mean()
        effect = treated_mean - control_mean
        stratified_effects.append(effect)

stratified_effect = np.mean(stratified_effects)
print(f"\n4. Stratification by PS: ${stratified_effect:.0f}")

# 5. Visualization
fig, axes = plt.subplots(2, 2, figsize=(14, 10))

# Treatment distribution by age
ax = axes[0, 0]
treated = df[df['treatment'] == 1]
control = df[df['treatment'] == 0]
ax.hist(control['age'], bins=20, alpha=0.6, label='Control', color='blue')
ax.hist(treated['age'], bins=20, alpha=0.6, label='Treated', color='red')
ax.set_xlabel('Age')
ax.set_ylabel('Frequency')
ax.set_title('Age Distribution by Treatment')
ax.legend()
ax.grid(True, alpha=0.3, axis='y')

# Salary vs Age (colored by treatment)
ax = axes[0, 1]
ax.scatter(control['age'], control['salary'], alpha=0.5, label='Control', s=30)
ax.scatter(treated['age'], treated['salary'], alpha=0.5, label='Treated', s=30, color='red')
ax.set_xlabel('Age')
ax.set_ylabel('Salary')
ax.set_title('Salary vs Age by Treatment')
ax.legend()
ax.grid(True, alpha=0.3)

# Propensity Score Distribution
ax = axes[1, 0]
ax.hist(df[df['treatment'] == 0]['propensity_score'], bins=20, alpha=0.6, label='Control', color='blue')
ax.hist(df[df['treatment'] == 1]['propensity_score'], bins=20, alpha=0.6, label='Treated', color='red')
ax.set_xlabel('Propensity Score')
ax.set_ylabel('Frequency')
ax.set_title('Propensity Score Distribution')
ax.legend()
ax.grid(True, alpha=0.3, axis='y')

# Treatment Effect Comparison
ax = axes[1, 1]
methods = ['Naive', 'Regression', 'PSM', 'Stratified']
effects = [naive_effect, regression_effect, psm_effect, stratified_effect]
true_effect = 5000

ax.bar(methods, effects, color=['red', 'orange', 'yellow', 'lightgreen'], alpha=0.7, edgecolor='black')
ax.axhline(y=true_effect, color='green', linestyle='--', linewidth=2, label=f'True Effect (${true_effect:.0f})')
ax.set_ylabel('Treatment Effect ($)')
ax.set_title('Treatment Effect Estimates by Method')
ax.legend()
ax.grid(True, alpha=0.3, axis='y')

for i, effect in enumerate(effects):
    ax.text(i, effect + 200, f'${effect:.0f}', ha='center', va='bottom')

plt.tight_layout()
plt.show()

# 6. Doubly Robust Estimation
from sklearn.ensemble import RandomForestRegressor

# Propensity score model
ps_model_dr = LogisticRegression().fit(df[['age']], df['treatment'])
ps_scores = ps_model_dr.predict_proba(df[['age']])[:, 1]

# Outcome model
outcome_model = RandomForestRegressor(n_estimators=50, random_state=42)
outcome_model.fit(df[['treatment', 'age']], df['salary'])

# Doubly robust estimator
treated_mask = df['treatment'] == 1
control_mask = df['treatment'] == 0

# Adjust for propensity score
treated_adjusted = (treated_mask.astype(int) * df['salary']) / (ps_scores + 0.01)
control_adjusted = (control_mask.astype(int) * df['salary']) / (1 - ps_scores + 0.01)

# Outcome predictions
pred_treated = outcome_model.predict(df[['treatment', 'age']].replace({'treatment': 0, 1: 1}))
pred_control = outcome_model.predict(df[['treatment', 'age']].replace({'treatment': 1, 0: 0}))

dr_effect = treated_adjusted.sum() / treated_mask.sum() - control_adjusted.sum() / control_mask.sum()
print(f"\n6. Doubly Robust Estimation: ${dr_effect:.0f}")

# 7. Heterogeneous Treatment Effects
print(f"\n7. Heterogeneous Treatment Effects (by Age Quartile):")

for age_q in pd.qcut(df['age'], q=4, duplicates='drop').unique():
    mask = (df['age'] >= age_q.left) & (df['age'] < age_q.right)
    stratum_data = df[mask]

    if (stratum_data['treatment'] == 0).sum() > 0 and (stratum_data['treatment'] == 1).sum() > 0:
        treated_mean = stratum_data[stratum_data['treatment'] == 1]['salary'].mean()
        control_mean = stratum_data[stratum_data['treatment'] == 0]['salary'].mean()
        effect = treated_mean - control_mean

        print(f"  Age {age_q.left:.0f}-{age_q.right:.0f}: ${effect:.0f}")

# 8. Sensitivity Analysis
print(f"\n8. Sensitivity Analysis (Hidden Confounder Impact):")

# Vary hidden confounder correlation with outcome
for hidden_effect in [1000, 2000, 5000, 10000]:
    adjusted_effect = regression_effect - hidden_effect * 0.1
    print(f"  If hidden confounder worth ${hidden_effect}: Effect = ${adjusted_effect:.0f}")

# 9. Summary Table
print(f"\n" + "="*60)
print("CAUSAL INFERENCE SUMMARY")
print("="*60)
print(f"True Treatment Effect: ${true_effect:,.0f}")
print(f"\nEstimates:")
print(f"  Naive (BIASED): ${naive_effect:,.0f}")
print(f"  Regression Adjustment: ${regression_effect:,.0f}")
print(f"  Propensity Score Matching: ${psm_effect:,.0f}")
print(f"  Stratification: ${stratified_effect:,.0f}")
print(f"  Doubly Robust: ${dr_effect:,.0f}")
print("="*60)

# 10. Causal Graph (Text representation)
print(f"\n10. Causal Graph (DAG):")
print(f"""
Age → Treatment ← (Selection Bias)
  ↓        ↓
  └─→ Salary

Interpretation:
- Age is a confounder
- Treatment causally affects Salary
- Age directly affects Salary
- Age affects probability of Treatment
""")

因果假设

  • 无混杂性:不存在未测量的混杂因素
  • 重叠性:倾向评分具有共同支持
  • SUTVA:单位之间不存在干扰
  • 一致性:处理只有一个版本

处理效应类型

  • ATE:平均处理效应(总体)
  • ATT:接受处理者的平均处理效应
  • CATE:条件平均处理效应
  • HTE:异质性处理效应

方法优势

  • RCT:黄金标准,可控制所有混杂因素
  • 匹配:平衡群体,保留重叠性
  • 回归:调整协变量
  • 工具变量:处理内生性
  • 因果森林:学习异质性效应

交付成果

  • 因果图可视化
  • 处理效应估计
  • 敏感性分析
  • 异质性处理效应
  • 协变量平衡评估
  • 倾向评分诊断
  • 最终因果推断报告

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